Package: LBDiscover
Title: Literature-Based Discovery Tools for Biomedical Research
Version: 0.1.0
Date: 2025-05-14
Authors@R: 
    person("Chao Liu", email = "chaoliu@cedarville.edu", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-9979-8272"))
Description: A suite of tools for literature-based discovery in
        biomedical research. Provides functions for retrieving
        scientific articles from PubMed and other NCBI databases,
        extracting biomedical entities (diseases, drugs, genes, etc.),
        building co-occurrence networks, and applying various discovery
        models including ABC, AnC, LSI, and BITOLA. The package also
        includes visualization tools for exploring discovered
        connections.
License: GPL-3
URL: https://github.com/chaoliu-cl/LBDiscover,
        http://liu-chao.site/LBDiscover/,
        https://liu-chao.site/LBDiscover/
BugReports: https://github.com/chaoliu-cl/LBDiscover/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: R (>= 4.1.0)
Imports: httr (>= 1.4.0), xml2 (>= 1.3.0), igraph (>= 1.2.0), Matrix
        (>= 1.3.0), utils, stats, grDevices, graphics, tools, rentrez
        (>= 1.2.0), jsonlite (>= 1.7.0)
Suggests: openxlsx (>= 4.2.0), SnowballC (>= 0.7.0), visNetwork (>=
        2.1.0), spacyr (>= 1.2.0), parallel, digest (>= 0.6.0), irlba
        (>= 2.3.0), knitr, rmarkdown, base64enc, reticulate, testthat
        (>= 3.0.0), mockery, covr, withr, htmltools
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: libglpk-dev libxml2-dev libssl-dev
Repository: https://chaoliu-cl.r-universe.dev
Date/Publication: 2025-10-05 00:54:04 UTC
RemoteUrl: https://github.com/chaoliu-cl/lbdiscover
RemoteRef: HEAD
RemoteSha: 60e965ad1fbd39738ecfab72cec9eff617055719
NeedsCompilation: no
Packaged: 2026-09-30 09:23:59 UTC; root
Author: Chao Liu [aut, cre] (ORCID: <https://orcid.org/0000-0002-9979-8272>)
Maintainer: Chao Liu <chaoliu@cedarville.edu>